../../tmp/servers/virsirnadb/728978163
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1842 | 1 | gctgtgctcgccattaaca | 19 | |
| S76772.1 | polyprotein [Coxsackie B4 virus CB4, host=mice, E2, originally derive | 5656 | ................... | 5674 | 100 |
| AF311939.1 | Human coxsackievirus B4 strain E2 variant, complete genome | 5656 | ................... | 5674 | 100 |
| AY843304.1 | Human enterovirus 86 strain BAN00-10354, complete genome | 5660 | ........t.......... | 5678 | 94 |
| AJ276224.1 | Human echovirus 11 genomic RNA for polyprotein | 5690 | .....a..t.......... | 5708 | 89 |
| AJ276224.1 | Human echovirus 11 genomic RNA for polyprotein | 7224 | ____...........____ | 7214 | 57 |
| AY896763.1 | Human enterovirus B strain CBV3-18219-02 from Moldova polyprotein gen | 5635 | ..c.....t.......... | 5653 | 89 |
| EU144042.1 | Human coxsackievirus B3 isolate CVB3-MCH polyprotein gene, complete c | 5660 | .....a..t.......... | 5678 | 89 |
| AB426611.1 | Human enterovirus 97 genomic RNA, complete genome, strain: DT94-0227 | 5672 | .....a..t.......... | 5690 | 89 |
| AB501329.1 | Human echovirus 13 gene for polyprotein, complete cds, strain: 2002-2 | 5670 | ..c.....t.......... | 5688 | 89 |
| AB501330.1 | Human echovirus 13 gene for polyprotein, complete cds, strain: 2002-2 | 5670 | ..c.....t.......... | 5688 | 89 |
| AB501331.1 | Human echovirus 13 gene for polyprotein, complete cds, strain: I5(1)- | 5670 | ..c.....t.......... | 5688 | 89 |
| AB501332.1 | Human echovirus 13 gene for polyprotein, complete cds, strain: S3(1)- | 5670 | ..c.....t.......... | 5688 | 89 |
| HM775882.1 | Human echovirus 5 isolate Kor06-ECV5-253cn, complete genome | 5689 | .....a..a.......... | 5707 | 89 |
| AY843306.1 | Human enterovirus 88 strain BAN01-10398, complete genome | 5692 | ...........t..a..t. | 5710 | 84 |
| EU131776.1 | Human enterovirus 71 strain N3340-TW-02, complete genome | 6923 | .a...........g.t.._ | 6940 | 78 |
| AY928383.1 | Human poliovirus 1 isolate d261-2002037607 polyprotein gene, complete | 4428 | ___.a..a........... | 4443 | 73 |
| AY928384.1 | Human poliovirus 1 isolate d224-2002037606 polyprotein gene, complete | 4428 | ___.a..a........... | 4443 | 73 |
| D00625.1 | POL2CG1 Human poliovirus 2 genomic RNA, complete genome | 6106 | .........a...______ | 6118 | 63 |
| M12197.1 | POL2LAN Poliovirus type 2 (Lansing strain), complete genome | 6106 | .........a...______ | 6118 | 63 |
| AY238473.1 | Human poliovirus 2 strain MEF-1 polyprotein gene, complete cds | 6106 | .........a...______ | 6118 | 63 |
| AF136379.1 | Enterovirus 71 isolate NCKU9822 polyprotein mRNA, complete cds | 5492 | .........c...______ | 5504 | 63 |
| AF119796.3 | Enterovirus 71 strain TW/2086/98 polyprotein gene, complete cds | 5490 | .........c...______ | 5502 | 63 |
| AF176044.1 | Enterovirus 71 polyprotein gene, complete cds | 5493 | .........c...______ | 5505 | 63 |
| AF304457.1 | Enterovirus 71 strain Tainan/5746/98 polyprotein mRNA, complete cds | 5492 | .........c...______ | 5504 | 63 |
| AF304458.1 | Enterovirus 71 strain Tainan/4643/98 polyprotein mRNA, complete cds | 5492 | .........c...______ | 5504 | 63 |
| AF304459.1 | Enterovirus 71 strain Tainan/6092/98 polyprotein mRNA, complete cds | 5492 | .........c...______ | 5504 | 63 |
| AY465356.1 | Human enterovirus 71 strain SHZH03, complete genome | 6923 | .a...........______ | 6935 | 63 |
| AY421761.1 | Human coxsackievirus A3 strain Olson, complete genome | 2545 | ...........t.______ | 2533 | 63 |
| DQ060149.1 | Human enterovirus 71 strain pinf7-54A from Taiwan, complete genome | 5492 | .........c...______ | 5504 | 63 |
| DQ133458.1 | Human enterovirus 71 strain 984 polyprotein gene, complete cds | 6923 | .a...........______ | 6935 | 63 |
| DQ341355.1 | Human enterovirus 71 isolate 06-KOR-00, complete genome | 5491 | .........c...______ | 5503 | 63 |
| DQ341356.1 | Human enterovirus 71 isolate 03-KOR-00, complete genome | 5491 | .........c...______ | 5503 | 63 |
| DQ341357.1 | Human enterovirus 71 isolate 7F-AUS-6-99, complete genome | 5491 | .........c...______ | 5503 | 63 |
| DQ341359.1 | Human enterovirus 71 isolate S10862-SAR-98, complete genome | 5491 | .........c...______ | 5503 | 63 |
| DQ381846.1 | Human enterovirus 71 strain 6F/AUS/6/99, complete genome | 5491 | .........c...______ | 5503 | 63 |
| AM396584.1 | Human enterovirus 71 gene for polyprotein, genomic RNA, isolate ENT/P | 5490 | .........c...______ | 5502 | 63 |
| AM396585.1 | Human enterovirus 71 gene for polyprotein, genomic RNA, isolate ENT/P | 5490 | .........c...______ | 5502 | 63 |
| FJ172159.1 | Human enterovirus 71 isolate NUH0075/SIN/08, complete genome | 5452 | .........c...______ | 5464 | 63 |
| FJ607338.1 | Human enterovirus 71 strain 605/SHENZHEN/08/China/HFMD Severe/2008, c | 6922 | .a...........______ | 6934 | 63 |
| HM002488.1 | Human enterovirus 71 strain BJ366, complete genome | 6923 | .a...........______ | 6935 | 63 |
| AB550338.1 | Human enterovirus 71 genomic RNA, complete genome, strain: 75-Yamagat | 6922 | .a...........______ | 6934 | 63 |
| AB550339.1 | Human enterovirus 71 genomic RNA, complete genome, strain: 75-Yamagat | 6922 | .a...........______ | 6934 | 63 |
| AB575935.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 480 | 5435 | .........c...______ | 5447 | 63 |
| AB575936.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 961 | 5430 | .........c...______ | 5442 | 63 |
| AB575938.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 100 | 5464 | .........c...______ | 5476 | 63 |
| AB575939.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 365 | 5422 | .........c...______ | 5434 | 63 |
| AB575941.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 248 | 5430 | .........c...______ | 5442 | 63 |
| AB575942.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 369 | 5425 | .........c...______ | 5437 | 63 |
| AB575948.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 101 | 5448 | .........c...______ | 5460 | 63 |